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Van Franeker, J.A. 1992. Top predators as indicators for ecosystem
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Schalk, P.H., Brey, T., Bathmann, U., Arntz, W., Gerdes, D., Dieckmann, G., Ekau, W., Gradinger, R., Plotz, J., Nothig, E., Schnack-Schiel, S.B., Siegel, V., Smetacek, V.S., & Van Franeker, J.A. 1993. Towards a conceptual model of the Weddell Sea ecosystem, Antarctica, In: Christensen, V. and Pauly, D. (Eds.). Trophic models of aquatic ecosystems. ICLARM Conf. Proc. 26: 323-327.

Van Franeker, J.A. 1994. A comparison of methods for counting seabirds at sea in the Southern Ocean. J. Field Ornithol. 65(1):96-108.

Van Franeker, J.A. 1996. Pelagic distribution and numbers of the Antarctic Petrel Thalassoica antarctica in the Weddell Sea during spring. Polar Biology 16: 565-572.

Van Franeker, J.A. 1996. Long term studies of Antarctic Fulmarine
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Van Franeker, J.A., Bathmann, U.V., & Mathot, S. 1997. Carbon fluxes to Antarctic top predators. Deep Sea Research II 44(1/2): 435-455.

Van Franeker, J.A., Gavrilo, M., Mehlum, F., Veit, R.R. & Woehler, E.J. 1999. Distribution and abundance of the Antarctic Petrel. Waterbirds 22(1): 14-28.

Van Franeker, J.A. 2000. Censuses of marine birds and mammals. Berichte zur Polarforschung 364: 101-109.

Van Franeker, J.A. 2001. Mirrors in ice - Fulmarine petrels and Antarctic ecosystems. PhD Thesis, University of Groningen, 12-Jan-2001. Alterra, Texel. 274pp. ISBN 90-367-1352-8.

Van Franeker, J.A., Van den Brink, N.W., Bathmann, U.V., Pollard, R.T., de Baar, H.J.W. & Wolff, W.J. 2002. Responses of seabirds, in particular prions (Pachyptila sp.), to small scale processes in the Antarctic Polar Front. Deep-Sea Research II 49: 3931-3950.

Van Franeker, J.A. 2002. Marine birds and seals around the Marguerite Bay and Bellingshausen Sea areas. Berichte zur Polar- und Meeresforschung 407: 76-82.

Van Franeker, J.A., Flores, H., Meijboom, A. & Van Dorssen, M. 2005. Spatial patterns in food requirements of marine birds and mammals in the Lazarev Sea, April 2004 (Polarstern ANT-XXI-4, SO-GLOBEC). Berichte zur Polarforschung 500: 206-211.

Van Franeker, J.A. 2007. Seabirds at sea. pp 870-874 in: Riffenburgh, B. (Ed.) Encyclopedia of the Antarctic. Routledge, New York.

Flores, H., Haas, C., Van Franeker, J.A. & Meesters, E. 2008. Density of pack-ice seals and penguins in the western Weddell Sea in relation to ice thickness and ocean depth. Deep-Sea Research II 55: 1068-1074.

Van Franeker, J.A., Flores, H. & Van Dorssen, M. 2009. The Surface and Under-Ice Trawl (SUIT). p 180-187 (Chpt 9) in: Flores, H., Frozen Desert Alive - the role of sea ice for pelagic macrofauna and its predators: implications for the Antarctic pack-ice food web. PhD Thesis, University of Groningen. 1 Mei 2009. Rijksuniversiteit Groningen, 240pp.

Delauyed IN PRESS
Berichte Zur Polarforschung Expeditie ANT-23-6 Winter 2006 “in press”
Van Franeker, J.A., Fijn, R., Flores, H., Meijboom, A. & Van Dorssen, M. ip. Marine birds and mammals wintering in the Lazarev Sea: further evidence of a major role of sea ice in structuring the Antarctic foodweb (Polarstern ANT-XXIII-6, LAKRIS winter expedition). Berichte zur Polarforschung (in press).

Berichte Zur Polarforschung Expeditie ANT-24-2 2007-08 “in press” Van Franeker, J.A., Feij, B., Flores, H., Meijboom, A. & Van Dorssen, M. in press. Marine birds and mammals in the Lazarev Sea: the summer influx (Polarstern ANT-24-2, LAKRIS summer expedition). Berichte zur Polarforschung in press.